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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
329
candidate regulatory elements
261
gene expression
189
target gene predictions
168
chromatin state
120
accessible chromatin
90
differential activity
34
variant allelic effects
26
eQTL
19
binding sites
19
histone modifications
11
Fine-mapped variants
2
caQTL
2
sQTL
2
variant to gene
Date released
473
September, 2022
311
February, 2021
140
September, 2023
47
March, 2023
41
February, 2024
39
May, 2021
37
August, 2021
30
May, 2020
25
June, 2020
23
January, 2020
21
March, 2020
20
January, 2021
17
February, 2020
7
August, 2018
7
October, 2019
6
August, 2017
6
January, 2022
5
October, 2022
4
March, 2024
3
May, 2019
3
May, 2022
2
April, 2019
2
November, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
717
bed bed3+
341
tsv
161
bed bed9
87
bigWig
87
txt
14
bigBed narrowPeak
7
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
1272
Homo sapiens
Biosample type
721
tissue
453
primary cell
92
cell line
6
in vitro differentiated cells
Organ
822
epithelium
649
kidney
466
brain
410
connective tissue
364
musculature of body
302
lung
270
intestine
260
vasculature
259
pancreas
245
heart
244
limb
218
bodily fluid
213
embryo
207
blood
201
blood vessel
194
skin of body
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
88
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
75
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1110
AMP
140
KPMP
ENCODE
20
T1D
2
community
Genome assembly (visualization)
908
hg19
230
GRCh38
award.project!
ENCODE
BIOSAMPLE
TYPE
1272 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
differential activity
variant allelic effects
eQTL
binding sites
histone modifications
Fine-mapped variants
caQTL
sQTL
variant to gene
tissue
kidney
29
7
14
16
10
1
1
1
2
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
islet of Langerhans
11
1
3
6
1
13
2
1
2
2
2
+ See 49 more…
primary cell
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
pancreatic beta cell
3
3
6
3
1
pancreatic ductal cell
3
2
4
3
1
1
2
pancreatic alpha cell
3
3
5
3
1
+ See 86 more…
cell line
EndoC_BH1
8
1
8
3
1
HEK293
3
1
1
1
2
1
LHCN-M2
2
1
1
1
1
1
A673
2
2
1
ACHN
2
1
1
1
+ See 16 more…
in vitro differentiated cells
pancreatic ductal cell
3
myotube
1
1
renal cell carcinoma
1
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