Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
194
gene expression
161
candidate regulatory elements
79
chromatin state
78
target gene predictions
56
differential activity
52
accessible chromatin
16
variant allelic effects
9
binding sites
8
histone modifications
3
eQTL
Date released
228
September, 2022
193
February, 2021
140
September, 2023
28
August, 2021
20
May, 2020
15
June, 2020
14
January, 2020
February, 2020
4
November, 2021
3
March, 2020
2
January, 2021
2
March, 2024
2
October, 2022
1
April, 2019
1
February, 2024
1
January, 2022
1
May, 2019
1
May, 2022
Available data
320
bed bed3+
250
tsv
87
txt
78
bed bed9
38
bigWig
2
bigBed bed9
1
bed bed9+
Organism
656
Homo sapiens
Biosample type
315
primary cell
299
tissue
41
cell line
1
in vitro differentiated cells
Organ
940
epithelium
643
kidney
449
connective tissue
448
brain
369
musculature of body
311
lung
289
intestine
275
pancreas
261
vasculature
244
heart
238
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
199
blood vessel
174
large intestine
154
liver
146
extraembryonic component
119
stomach
107
eye
89
bone element
87
mammary gland
84
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
71
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
Project
510
AMP
140
KPMP
4
ENCODE
2
T1D
Genome assembly (visualization)
399
hg19
107
GRCh38
month_released!
February, 2020
BIOSAMPLE
TYPE
656 results
search-icon
table-tab-icon
Clear Filters
gene expression
candidate regulatory elements
chromatin state
target gene predictions
differential activity
accessible chromatin
variant allelic effects
binding sites
histone modifications
eQTL
primary cell
epithelial cell of proximal tubule
15
2
1
1
1
1
1
glomerular endothelial cell
13
2
1
1
2
1
glomerular visceral epithelial cell
4
2
1
1
2
kidney tubule cell
3
2
2
2
kidney glomerular epithelial cell
2
1
1
2
1
+ See 68 more…
tissue
kidney
7
29
16
14
10
1
1
2
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
left kidney
18
9
9
+ See 13 more…
cell line
HEK293
3
1
1
1
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
G401
2
1
1
+ See 7 more…
in vitro differentiated cells
renal cell carcinoma
1
See all biosamples
Download