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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
272
candidate regulatory elements
207
gene expression
154
target gene predictions
151
chromatin state
94
accessible chromatin
56
differential activity
56
histone modifications
36
Fine-mapped variants
33
variant allelic effects
25
binding sites
20
eQTL
Date released
408
September, 2022
303
February, 2021
143
September, 2023
43
January, 2020
41
March, 2020
39
May, 2020
36
June, 2020
28
August, 2021
February, 2020
19
January, 2022
11
May, 2021
8
October, 2022
6
August, 2017
5
May, 2019
4
November, 2021
3
March, 2024
2
February, 2024
2
January, 2021
1
April, 2019
1
May, 2022
1
November, 2019
Available data
629
bed bed3+
299
tsv
144
bed bed9
87
txt
59
bigWig
8
bigBed bed9
1
bed bed9+
Organism
1104
Homo sapiens
Biosample type
630
tissue
350
primary cell
118
cell line
5
in vitro differentiated cells
1
stem cell
Organ
940
epithelium
643
kidney
451
connective tissue
448
brain
369
musculature of body
311
lung
289
intestine
275
pancreas
261
vasculature
244
heart
238
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
199
blood vessel
174
large intestine
154
liver
146
extraembryonic component
119
stomach
107
eye
89
bone element
87
mammary gland
84
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
71
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
Project
958
AMP
140
KPMP
4
ENCODE
2
T1D
Genome assembly (visualization)
810
hg19
247
GRCh38
month_released!
February, 2020
BIOSAMPLE
TYPE
1104 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
differential activity
histone modifications
Fine-mapped variants
variant allelic effects
binding sites
eQTL
tissue
kidney
29
7
14
16
10
2
1
1
1
brain
29
16
18
2
3
1
1
2
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
+ See 73 more…
primary cell
epithelial cell of proximal tubule
2
15
1
1
1
1
1
glomerular endothelial cell
2
13
1
1
2
1
glomerular visceral epithelial cell
2
4
1
1
2
kidney tubule cell
3
2
2
2
choroid plexus epithelial cell
2
1
1
1
1
1
+ See 77 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
HEK293
3
1
1
1
1
2
SK-N-MC
2
1
1
1
1
2
+ See 21 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
renal cell carcinoma
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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