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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
270
candidate regulatory elements
221
gene expression
151
target gene predictions
149
chromatin state
92
accessible chromatin
56
differential activity
54
histone modifications
36
Fine-mapped variants
33
eQTL
33
variant allelic effects
23
binding sites
Date released
405
September, 2022
298
February, 2021
143
September, 2023
43
January, 2020
41
March, 2020
38
May, 2020
36
June, 2020
28
August, 2021
27
February, 2020
19
January, 2022
11
May, 2021
8
October, 2022
6
August, 2017
5
May, 2019
3
March, 2024
3
November, 2021
2
February, 2024
1
April, 2019
1
November, 2019
Available data
618
bed bed3+
318
tsv
143
bed bed9
87
txt
57
bigWig
8
bigBed bed9
Organism
1117
Homo sapiens
Biosample type
650
tissue
344
primary cell
118
cell line
5
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
975
AMP
140
KPMP
3
ENCODE
Genome assembly (visualization)
810
hg19
257
GRCh38
BIOSAMPLE
TYPE
1118 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
differential activity
histone modifications
Fine-mapped variants
eQTL
variant allelic effects
binding sites
tissue
kidney
29
7
14
16
10
2
1
1
1
brain
29
1
16
18
2
3
2
1
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
+ See 76 more…
primary cell
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
glomerular visceral epithelial cell
2
5
1
1
2
kidney tubule cell
3
1
2
2
2
kidney glomerular epithelial cell
2
1
1
1
2
1
+ See 72 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
HEK293
3
1
1
1
1
2
SK-N-MC
2
1
1
1
1
2
+ See 21 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
renal cell carcinoma
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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