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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
268
gene expression
243
candidate regulatory elements
212
accessible chromatin
188
target gene predictions
121
chromatin state
94
differential activity
41
binding sites
33
histone modifications
24
variant allelic effects
3
eQTL
2
caQTL
Date released
349
September, 2022
300
February, 2021
160
September, 2023
128
November, 2021
February, 2024
38
March, 2023
35
August, 2021
34
May, 2021
33
June, 2020
27
May, 2020
20
January, 2020
20
January, 2021
15
November, 2022
12
February, 2023
10
February, 2020
9
March, 2020
7
April, 2020
7
October, 2022
6
August, 2018
5
October, 2019
4
March, 2024
3
August, 2017
2
May, 2022
1
April, 2019
1
January, 2022
1
July, 2020
1
May, 2019
1
November, 2019
Available data
740
bed bed3+
342
tsv
162
bigWig
118
bed bed9
90
txt
4
bigBed bed9
4
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1229
Homo sapiens
Biosample type
781
primary cell
345
tissue
82
cell line
21
in vitro differentiated cells
Organ
873
epithelium
651
kidney
465
brain
440
connective tissue
360
musculature of body
310
lung
283
intestine
252
pancreas
250
heart
249
vasculature
244
limb
203
skin of body
190
bodily fluid
189
blood vessel
179
blood
171
large intestine
164
embryo
146
extraembryonic component
127
liver
117
stomach
108
eye
89
bone element
87
adipose tissue
86
mammary gland
84
small intestine
77
prostate gland
75
artery
73
placenta
72
adrenal gland
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
32
uterus
26
testis
25
nerve
23
lymphoid tissue
23
ovary
23
vein
22
thyroid gland
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
912
AMP
160
KPMP
128
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
858
hg19
288
GRCh38
month_released!
February, 2024
BIOSAMPLE
TYPE
1229 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
8
14
7
2
1
2
epithelial cell of proximal tubule
16
2
1
1
1
1
1
hepatocyte
8
1
3
3
1
1
4
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
6
2
4
5
2
1
+ See 151 more…
tissue
kidney
7
29
10
14
16
1
2
1
1
right kidney
20
1
10
10
1
renal cortex interstitium
20
1
9
9
1
renal pelvis
19
2
9
9
1
left kidney
18
9
9
+ See 21 more…
cell line
EndoC_BH1
8
8
1
3
1
HEK293
3
1
1
1
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
+ See 17 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
+ See 3 more…
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