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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
284
gene expression
243
candidate regulatory elements
238
accessible chromatin
188
target gene predictions
121
chromatin state
94
differential activity
50
variant allelic effects
47
binding sites
33
histone modifications
4
eQTL
2
caQTL
Date released
349
September, 2022
300
February, 2021
160
September, 2023
128
November, 2021
76
February, 2024
38
March, 2023
35
August, 2021
34
May, 2021
33
June, 2020
27
May, 2020
20
January, 2020
20
January, 2021
15
November, 2022
12
February, 2023
10
February, 2020
9
March, 2020
7
April, 2020
7
October, 2022
6
August, 2018
5
October, 2019
4
March, 2024
3
August, 2017
2
May, 2022
1
April, 2019
January, 2022
1
July, 2020
1
May, 2019
1
November, 2019
Available data
798
bed bed3+
357
tsv
195
bigWig
118
bed bed9
90
txt
14
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1304
Homo sapiens
Biosample type
841
primary cell
354
tissue
82
cell line
27
in vitro differentiated cells
Organ
949
epithelium
651
kidney
452
connective tissue
448
brain
374
musculature of body
310
lung
286
intestine
273
pancreas
263
vasculature
252
heart
242
limb
218
bodily fluid
215
embryo
207
blood
201
blood vessel
201
skin of body
172
large intestine
155
liver
145
extraembryonic component
118
stomach
109
eye
89
bone element
87
mammary gland
86
adipose tissue
83
small intestine
82
uterus
77
prostate gland
72
adrenal gland
72
artery
72
placenta
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
42
spinal cord
33
spleen
24
lymphoid tissue
24
nerve
24
testis
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
987
AMP
160
KPMP
128
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
919
hg19
319
GRCh38
month_released!
January, 2022
BIOSAMPLE
TYPE
1304 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
differential activity
variant allelic effects
binding sites
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
1
8
3
1
2
1
4
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
6
2
4
5
1
2
+ See 154 more…
tissue
kidney
7
29
10
14
16
1
1
2
1
right kidney
20
1
10
10
1
renal cortex interstitium
20
1
9
9
1
renal pelvis
19
2
9
9
1
left kidney
18
9
9
+ See 29 more…
cell line
EndoC_BH1
8
8
1
3
1
HEK293
3
1
1
1
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
+ See 17 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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