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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
182
candidate regulatory elements
142
gene expression
96
target gene predictions
94
chromatin state
74
accessible chromatin
20
binding sites
20
histone modifications
20
variant allelic effects
12
eQTL
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
271
September, 2022
214
February, 2021
September, 2023
38
August, 2021
30
February, 2024
22
May, 2020
20
June, 2020
17
January, 2020
13
March, 2020
11
February, 2020
8
November, 2021
4
March, 2023
3
August, 2017
3
May, 2021
3
October, 2022
2
January, 2022
2
March, 2024
2
May, 2022
1
April, 2019
1
July, 2020
1
May, 2019
1
November, 2019
1
September, 2018
Available data
410
bed bed3+
139
tsv
91
bed bed9
87
txt
59
bigWig
3
bigBed bed9
3
csv
1
bam
Organism
668
Homo sapiens
Biosample type
359
tissue
232
primary cell
69
cell line
8
in vitro differentiated cells
Organ
794
epithelium
512
kidney
463
brain
441
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
255
heart
244
limb
231
vasculature
218
bodily fluid
215
embryo
207
blood
204
skin of body
184
blood vessel
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
70
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
660
AMP
8
ENCODE
Genome assembly (visualization)
511
hg19
165
GRCh38
2
hg18
month_released!
September, 2023
BIOSAMPLE
TYPE
668 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
variant allelic effects
eQTL
differential activity
Fine-mapped variants
caQTL
tissue
kidney
29
7
14
16
10
1
2
1
1
liver
13
1
10
9
4
1
2
7
1
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
+ See 17 more…
primary cell
hepatocyte
1
13
3
1
8
1
4
2
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
endothelial cell of hepatic sinusoid
4
6
6
glomerular visceral epithelial cell
2
5
1
1
2
+ See 40 more…
cell line
HepG2
2
3
2
2
3
5
HEK293
3
1
1
1
2
1
HuH-7
1
1
1
1
1
1
ACHN
2
1
1
1
Caki2
2
1
1
1
+ See 11 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
renal cell carcinoma
1
See all biosamples
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