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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
261
candidate regulatory elements
208
gene expression
131
chromatin state
128
target gene predictions
71
accessible chromatin
56
differential activity
24
variant allelic effects
10
eQTL
9
Fine-mapped variants
9
binding sites
8
histone modifications
Date released
375
September, 2022
250
February, 2021
140
September, 2023
29
May, 2020
28
August, 2021
22
June, 2020
21
January, 2020
15
February, 2020
12
March, 2020
4
January, 2022
4
March, 2024
3
May, 2019
3
May, 2021
3
November, 2021
2
November, 2019
2
October, 2022
1
April, 2019
1
February, 2024
Available data
497
bed bed3+
269
tsv
131
bed bed9
87
txt
50
bigWig
6
bigBed bed9
Organism
915
Homo sapiens
Biosample type
548
tissue
314
primary cell
52
cell line
1
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
772
AMP
140
KPMP
3
ENCODE
Genome assembly (visualization)
641
hg19
188
GRCh38
BIOSAMPLE
TYPE
915 results
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Clear Filters
candidate regulatory elements
gene expression
chromatin state
target gene predictions
accessible chromatin
differential activity
variant allelic effects
eQTL
Fine-mapped variants
binding sites
histone modifications
tissue
kidney
29
7
16
14
10
1
1
1
2
muscle of arm
33
16
16
1
1
muscle of leg
27
15
14
2
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
+ See 40 more…
primary cell
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
glomerular visceral epithelial cell
2
5
1
1
2
kidney tubule cell
3
1
2
2
2
kidney glomerular epithelial cell
2
1
1
1
2
1
+ See 65 more…
cell line
HEK293
3
1
1
1
2
1
GM23248
2
1
1
1
1
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
+ See 9 more…
in vitro differentiated cells
renal cell carcinoma
1
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