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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
212
candidate regulatory elements
205
gene expression
116
accessible chromatin
106
chromatin state
104
target gene predictions
56
differential activity
20
variant allelic effects
16
binding sites
13
histone modifications
8
eQTL
3
Fine-mapped variants
Date released
309
September, 2022
226
February, 2021
140
September, 2023
28
August, 2021
24
February, 2023
24
June, 2020
24
May, 2020
22
November, 2022
17
January, 2020
14
February, 2020
9
November, 2021
6
March, 2020
5
October, 2022
3
January, 2022
2
February, 2024
2
March, 2024
1
April, 2019
1
May, 2019
1
May, 2021
1
November, 2019
Available data
477
bed bed3+
259
tsv
106
bed bed9
87
txt
76
bigWig
3
bigBed bed9
Organism
859
Homo sapiens
Biosample type
456
tissue
342
primary cell
54
cell line
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
710
AMP
140
KPMP
9
ENCODE
Genome assembly (visualization)
588
hg19
151
GRCh38
BIOSAMPLE
TYPE
859 results
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Clear Filters
candidate regulatory elements
gene expression
accessible chromatin
chromatin state
target gene predictions
differential activity
variant allelic effects
binding sites
histone modifications
eQTL
Fine-mapped variants
tissue
kidney
29
7
10
16
14
1
1
2
1
placenta
26
1
14
15
1
2
1
right kidney
20
1
10
10
1
renal cortex interstitium
20
1
9
9
1
renal pelvis
19
2
9
9
1
+ See 21 more…
primary cell
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
2
1
1
1
glomerular visceral epithelial cell
2
5
2
1
1
kidney tubule cell
3
1
2
2
2
retinal pigment epithelial cell
2
3
1
1
2
1
+ See 72 more…
cell line
HEK293
3
1
1
1
2
1
WERI-Rb-1
2
1
1
1
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
+ See 11 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
renal cell carcinoma
1
See all biosamples
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