Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
215
candidate regulatory elements
136
target gene predictions
120
gene expression
108
chromatin state
61
accessible chromatin
56
binding sites
32
histone modifications
16
variant allelic effects
8
eQTL
1
pQTL
Date released
312
September, 2022
270
February, 2021
31
August, 2021
29
February, 2024
29
June, 2020
22
October, 2022
19
May, 2020
14
January, 2020
9
February, 2020
4
March, 2024
4
May, 2021
3
January, 2022
3
March, 2020
2
August, 2017
1
April, 2019
1
May, 2019
Available data
515
bed bed3+
113
tsv
106
bed bed9
87
txt
33
bigWig
2
bigBed bed9
Organism
753
Homo sapiens
Biosample type
323
tissue
253
cell line
176
primary cell
1
in vitro differentiated cells
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
753
AMP
140
KPMP
3
ENCODE
Genome assembly (visualization)
624
hg19
161
GRCh38
BIOSAMPLE
TYPE
753 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
gene expression
chromatin state
accessible chromatin
binding sites
histone modifications
variant allelic effects
eQTL
pQTL
tissue
kidney
29
14
7
16
10
1
2
1
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
left kidney
18
9
9
+ See 19 more…
cell line
K562
7
23
7
1
2
1
GM12878
2
8
2
1
2
1
HEK293
3
1
1
1
2
1
GM06990
2
1
1
1
2
1
GM19240
1
2
1
1
2
1
+ See 40 more…
primary cell
epithelial cell of proximal tubule
2
1
16
1
1
1
1
glomerular endothelial cell
2
1
14
1
2
1
glomerular visceral epithelial cell
2
1
5
1
2
kidney tubule cell
3
2
1
2
2
kidney glomerular epithelial cell
2
1
1
1
2
1
+ See 36 more…
in vitro differentiated cells
renal cell carcinoma
1
See all biosamples
Download