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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
203
gene expression
196
candidate regulatory elements
98
target gene predictions
96
chromatin state
59
accessible chromatin
56
differential activity
22
binding sites
17
variant allelic effects
12
histone modifications
6
eQTL
Date released
279
September, 2022
224
February, 2021
140
September, 2023
28
August, 2021
21
June, 2020
19
May, 2020
14
January, 2020
9
February, 2020
9
November, 2021
6
October, 2022
3
January, 2022
3
March, 2020
3
March, 2024
2
February, 2024
2
May, 2021
1
April, 2019
1
August, 2017
1
May, 2019
Available data
401
bed bed3+
252
tsv
95
bed bed9
87
txt
39
bigWig
2
bigBed bed9
Organism
765
Homo sapiens
Biosample type
356
primary cell
321
tissue
84
cell line
4
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
616
AMP
140
KPMP
9
ENCODE
Genome assembly (visualization)
497
hg19
131
GRCh38
BIOSAMPLE
TYPE
765 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
primary cell
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
1
1
2
1
mammary gland epithelial cell
3
4
3
1
1
1
glomerular visceral epithelial cell
5
2
1
1
2
kidney tubule cell
1
3
2
2
2
+ See 69 more…
tissue
kidney
7
29
14
16
10
1
1
2
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
left kidney
18
9
9
+ See 17 more…
cell line
MCF-7
9
6
5
1
3
2
HEK293
3
1
1
1
2
1
T47D
3
2
2
NT2-D1 cell
1
1
1
1
2
ACHN
2
1
1
1
+ See 12 more…
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
renal cell carcinoma
1
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