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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
44
target gene predictions
36
chromatin state
10
accessible chromatin
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
66
September, 2022
7
June, 2020
6
November, 2021
5
February, 2021
5
May, 2021
3
August, 2017
2
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
Available data
62
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
99
Homo sapiens
Biosample type
74
tissue
19
cell line
6
primary cell
Organ
806
epithelium
486
kidney
347
connective tissue
339
brain
248
pancreas
222
musculature of body
195
vasculature
180
heart
171
lung
170
intestine
149
blood vessel
148
limb
145
embryo
125
bodily fluid
120
liver
119
blood
111
skin of body
99
large intestine
85
eye
84
extraembryonic component
70
uterus
68
adipose tissue
68
stomach
59
artery
56
bone element
47
mammary gland
47
small intestine
45
adrenal gland
43
prostate gland
41
placenta
33
ureter
30
gonad
29
lymph node
29
penis
28
esophagus
28
thymus
25
spinal cord
19
nerve
18
spleen
15
lymphatic vessel
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
14
testis
14
vein
13
pituitary gland
11
mouth
10
bronchus
9
bone marrow
8
breast
7
urinary bladder
6
tongue
6
vagina
3
nose
3
trachea
1
pericardium
Project
93
AMP
6
ENCODE
Genome assembly (visualization)
95
hg19
43
GRCh38
annotation_type!
candidate regulatory elements
binding sites
BIOSAMPLE
TYPE
99 results
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Clear Filters
target gene predictions
chromatin state
accessible chromatin
histone modifications
eQTL
gene expression
tissue
large intestine
14
13
1
1
sigmoid colon
7
5
1
transverse colon
5
4
1
1
colonic mucosa
2
3
1
mucosa of rectum
2
3
+ See 5 more…
cell line
HT-29
2
1
1
1
HCT116
3
1
SW480
1
1
1
1
HCT-116 cell
1
1
RKO
1
1
+ See 1 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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