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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
49
target gene predictions
43
chromatin state
11
binding sites
9
accessible chromatin
9
histone modifications
2
eQTL
2
gene expression
Date released
80
September, 2022
18
February, 2021
9
June, 2020
6
May, 2021
3
August, 2017
2
February, 2024
2
January, 2022
2
March, 2024
2
October, 2022
1
March, 2020
Available data
81
bed bed3+
40
bed bed9
2
tsv
Organism
125
Homo sapiens
Biosample type
77
tissue
45
cell line
primary cell
3
in vitro differentiated cells
Organ
329
brain
200
kidney
183
musculature of body
166
bodily fluid
160
heart
159
blood
155
lung
153
intestine
149
limb
146
connective tissue
143
embryo
127
pancreas
116
epithelium
99
large intestine
79
vasculature
74
eye
72
blood vessel
72
liver
69
adipose tissue
69
uterus
67
skin of body
60
extraembryonic component
57
stomach
52
bone element
45
prostate gland
43
small intestine
41
lymph node
40
artery
36
placenta
34
adrenal gland
33
ureter
29
gonad
28
thymus
26
mammary gland
25
spinal cord
20
esophagus
19
nerve
19
spleen
16
penis
16
testis
15
lymphoid tissue
14
skeleton
13
ovary
13
pituitary gland
12
thyroid gland
9
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
4
lymphatic vessel
3
nose
3
vein
Project
125
AMP
Genome assembly (visualization)
121
hg19
44
GRCh38
annotation_type!
candidate regulatory elements
biosample_type!
primary cell
BIOSAMPLE
TYPE
125 results
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Clear Filters
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
eQTL
gene expression
tissue
large intestine
14
13
1
1
sigmoid colon
7
5
1
transverse colon
5
4
1
1
colonic mucosa
2
3
1
mucosa of rectum
2
3
+ See 7 more…
cell line
MCF-7
6
5
3
1
2
HT-29
2
1
1
1
1
SW480
1
1
1
1
1
HCT-116 cell
1
2
1
HCT116
3
1
+ See 3 more…
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
See all biosamples
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