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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
44
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
66
September, 2022
10
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
2
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
68
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
105
Homo sapiens
Biosample type
75
tissue
24
cell line
6
primary cell
Organ
849
epithelium
493
kidney
380
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
99
AMP
6
ENCODE
Genome assembly (visualization)
101
hg19
43
GRCh38
annotation_type!
candidate regulatory elements
organ_slims!
embryo
ureter
BIOSAMPLE
TYPE
105 results
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Clear Filters
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
14
13
1
1
sigmoid colon
7
5
1
transverse colon
5
4
1
1
colonic mucosa
2
3
1
mucosa of rectum
2
3
+ See 6 more…
cell line
HT-29
2
1
1
1
1
SW480
1
1
1
1
1
HCT-116 cell
1
1
2
HCT116
3
1
RKO
1
1
1
+ See 1 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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