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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
255
gene expression
219
accessible chromatin
168
candidate regulatory elements
162
target gene predictions
92
differential activity
88
chromatin state
49
binding sites
41
variant allelic effects
33
histone modifications
eQTL
2
caQTL
Date released
246
September, 2022
242
February, 2021
155
September, 2023
127
November, 2021
77
February, 2024
39
May, 2021
38
March, 2023
32
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
8
February, 2020
7
April, 2020
7
March, 2020
7
October, 2022
6
August, 2017
6
August, 2018
5
October, 2019
4
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
674
bed bed3+
326
tsv
176
bigWig
82
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1109
Homo sapiens
Biosample type
818
primary cell
191
tissue
74
cell line
26
in vitro differentiated cells
Organ
946
epithelium
648
kidney
439
connective tissue
437
brain
368
musculature of body
310
lung
286
intestine
262
pancreas
260
vasculature
249
heart
239
limb
216
bodily fluid
215
embryo
205
blood
201
skin of body
198
blood vessel
172
large intestine
148
liver
145
extraembryonic component
118
stomach
108
eye
89
bone element
87
mammary gland
83
small intestine
82
uterus
77
prostate gland
76
adipose tissue
72
adrenal gland
72
placenta
70
artery
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
41
spinal cord
33
spleen
24
lymphoid tissue
24
testis
23
nerve
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
798
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
758
hg19
268
GRCh38
annotation_type!
eQTL
BIOSAMPLE
TYPE
1109 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
2
hepatocyte
13
8
1
3
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 146 more…
tissue
large intestine
1
27
14
13
1
sigmoid colon
1
10
7
5
pigmented layer of retina
20
transverse colon
1
8
5
4
breast epithelium
1
5
3
2
+ See 24 more…
cell line
EndoC_BH1
8
8
1
3
1
HT-29
1
2
2
1
1
1
SW480
1
2
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
+ See 13 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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