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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
Date released
65
September, 2022
46
February, 2021
7
June, 2020
3
August, 2017
3
November, 2021
2
January, 2022
1
February, 2024
1
October, 2022
Available data
93
bed bed3+
33
bed bed9
3
bigWig
tsv
Organism
128
Homo sapiens
Biosample type
99
tissue
26
cell line
3
primary cell
Organ
503
epithelium
326
kidney
323
brain
317
connective tissue
281
musculature of body
232
lung
213
intestine
178
limb
177
heart
171
vasculature
160
bodily fluid
158
skin of body
157
pancreas
151
blood
132
blood vessel
128
large intestine
121
embryo
110
extraembryonic component
107
liver
98
eye
87
stomach
69
bone element
68
mammary gland
62
prostate gland
61
small intestine
56
placenta
54
adipose tissue
53
lymph node
53
penis
51
adrenal gland
51
artery
51
ureter
37
gonad
35
thymus
33
esophagus
29
spinal cord
25
spleen
23
uterus
21
testis
18
vein
17
lymphoid tissue
16
nerve
16
thyroid gland
15
ovary
15
skeleton
14
mouth
13
bronchus
13
lymphatic vessel
10
bone marrow
9
breast
7
tongue
7
vagina
6
urinary bladder
5
trachea
3
nose
2
pituitary gland
1
pericardium
Project
125
AMP
3
ENCODE
Genome assembly (visualization)
126
hg19
38
GRCh38
annotation_type!
target gene predictions
files.file_type!
tsv
BIOSAMPLE
TYPE
128 results
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Clear Filters
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
tissue
large intestine
27
13
1
1
sigmoid colon
10
5
1
transverse colon
8
4
1
1
colonic mucosa
4
3
1
mucosa of rectum
4
3
+ See 5 more…
cell line
HT-29
2
1
1
1
1
SW480
2
1
1
1
1
RKO
1
1
1
1
HCT-116 cell
1
2
HCT116
2
1
+ See 3 more…
primary cell
colon epithelial cell
3
See all biosamples
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