Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
gene expression
Date released
65
September, 2022
46
February, 2021
7
June, 2020
3
August, 2017
3
November, 2021
January, 2022
2
March, 2024
1
February, 2024
1
October, 2022
Available data
93
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
128
Homo sapiens
Biosample type
99
tissue
26
cell line
3
primary cell
Organ
827
epithelium
576
kidney
374
connective tissue
372
brain
294
musculature of body
232
lung
232
vasculature
229
pancreas
213
intestine
203
heart
193
limb
176
blood vessel
161
bodily fluid
157
skin of body
152
blood
134
liver
131
embryo
128
large intestine
109
extraembryonic component
100
eye
88
stomach
73
adipose tissue
73
bone element
68
mammary gland
64
artery
62
prostate gland
60
small intestine
55
placenta
53
lymph node
53
penis
51
adrenal gland
51
ureter
36
gonad
35
thymus
33
spinal cord
32
esophagus
25
spleen
24
uterus
21
nerve
20
testis
19
vein
18
lymphatic vessel
18
lymphoid tissue
16
thyroid gland
15
ovary
15
skeleton
14
mouth
13
bronchus
10
bone marrow
9
breast
8
tongue
7
urinary bladder
7
vagina
5
trachea
3
nose
2
pituitary gland
1
pericardium
Project
125
AMP
3
ENCODE
Genome assembly (visualization)
126
hg19
36
GRCh38
annotation_type!
target gene predictions
month_released!
January, 2022
BIOSAMPLE
TYPE
128 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
tissue
large intestine
27
13
1
1
sigmoid colon
10
5
1
transverse colon
8
4
1
colonic mucosa
4
3
1
mucosa of rectum
4
3
+ See 6 more…
cell line
HT-29
2
1
1
1
1
SW480
2
1
1
1
1
RKO
1
1
1
1
HCT-116 cell
1
2
HCT116
2
1
+ See 3 more…
primary cell
colon epithelial cell
3
See all biosamples
Download