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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
112
candidate regulatory elements
99
target gene predictions
61
chromatin state
51
binding sites
29
histone modifications
22
accessible chromatin
2
eQTL
Date released
167
September, 2022
116
February, 2021
31
February, 2024
20
October, 2022
19
June, 2020
9
May, 2021
6
November, 2021
5
August, 2017
2
August, 2021
1
March, 2020
Available data
318
bed bed3+
56
bed bed9
3
bigWig
Organism
376
Homo sapiens
Biosample type
229
cell line
132
tissue
15
primary cell
Organ
600
epithelium
423
brain
387
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
229
heart
217
bodily fluid
206
blood
205
embryo
204
vasculature
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
124
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
370
AMP
6
ENCODE
Genome assembly (visualization)
376
hg19
94
GRCh38
BIOSAMPLE
TYPE
376 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
eQTL
cell line
K562
7
23
7
2
1
1
GM12878
2
8
2
2
1
1
GM06990
2
1
1
2
1
1
GM19240
1
2
1
2
1
1
HAP-1
2
2
1
1
1
1
+ See 31 more…
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 5 more…
primary cell
colon epithelial cell
3
3
peripheral blood mononuclear cell
4
1
1
peripheral blood stem cell
1
1
1
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