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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
36
chromatin state
accessible chromatin
6
binding sites
5
histone modifications
2
gene expression
Date released
98
September, 2022
46
February, 2021
5
May, 2021
3
August, 2017
3
February, 2024
3
November, 2021
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
127
bed bed3+
33
bed bed9
2
tsv
Organism
162
Homo sapiens
Biosample type
129
tissue
30
cell line
3
primary cell
Organ
737
epithelium
601
kidney
407
brain
364
connective tissue
347
musculature of body
295
lung
265
intestine
227
vasculature
226
heart
222
limb
208
pancreas
206
bodily fluid
203
embryo
195
blood
188
skin of body
175
blood vessel
162
large intestine
136
extraembryonic component
131
liver
110
stomach
80
mammary gland
80
small intestine
79
adipose tissue
79
uterus
74
bone element
72
prostate gland
68
placenta
65
adrenal gland
61
artery
61
penis
60
ureter
54
lymph node
50
eye
47
thymus
42
gonad
40
spinal cord
38
esophagus
31
spleen
22
lymphoid tissue
22
testis
21
nerve
21
vein
20
ovary
20
thyroid gland
17
lymphatic vessel
17
mouth
13
bronchus
12
pituitary gland
11
bone marrow
11
breast
10
skeleton
9
tongue
9
urinary bladder
9
vagina
4
trachea
3
nose
1
pericardium
Project
159
AMP
3
ENCODE
Genome assembly (visualization)
160
hg19
38
GRCh38
month_released!
January, 2022
annotation_type!
accessible chromatin
BIOSAMPLE
TYPE
162 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
gene expression
tissue
large intestine
27
14
13
1
sigmoid colon
10
7
5
transverse colon
8
5
4
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 6 more…
cell line
HT-29
2
2
1
1
1
HCT116
2
3
1
SW480
2
1
1
1
1
HCT-116 cell
1
2
RKO
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
See all biosamples
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