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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
11
target gene predictions
10
accessible chromatin
6
binding sites
5
histone modifications
3
chromatin state
2
eQTL
2
gene expression
Date released
September, 2022
10
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
2
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
35
bed bed3+
3
bigWig
2
tsv
Organism
39
Homo sapiens
Biosample type
17
tissue
16
cell line
6
primary cell
Organ
746
epithelium
343
kidney
300
connective tissue
235
brain
222
pancreas
165
vasculature
124
blood vessel
121
bodily fluid
118
blood
113
heart
104
embryo
101
liver
93
musculature of body
73
eye
66
intestine
66
uterus
61
skin of body
58
limb
54
adipose tissue
50
artery
40
lung
39
large intestine
36
bone element
31
mammary gland
25
lymph node
25
prostate gland
22
stomach
21
extraembryonic component
17
adrenal gland
17
gonad
16
penis
14
esophagus
13
lymphatic vessel
13
nerve
13
pituitary gland
13
vein
12
placenta
11
spinal cord
9
bone marrow
9
small intestine
9
testis
8
bronchus
8
skeleton
7
ovary
7
spleen
7
thymus
7
thyroid gland
7
ureter
5
lymphoid tissue
5
trachea
4
breast
3
mouth
3
urinary bladder
2
tongue
2
vagina
1
nose
1
pericardium
Project
33
AMP
6
ENCODE
Genome assembly (visualization)
35
hg19
10
GRCh38
month_released!
September, 2022
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
39 results
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Clear Filters
target gene predictions
accessible chromatin
binding sites
histone modifications
chromatin state
eQTL
gene expression
tissue
large intestine
1
1
1
sigmoid colon
2
1
transverse colon
1
1
1
colonic mucosa
1
1
colon
1
+ See 5 more…
cell line
HCT-116 cell
1
1
2
HT-29
1
1
1
1
RKO
1
1
1
SW480
1
1
1
HCT116
2
primary cell
colon epithelial cell
3
3
See all biosamples
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