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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
37
candidate regulatory elements
10
accessible chromatin
6
binding sites
6
target gene predictions
5
histone modifications
3
chromatin state
2
eQTL
2
gene expression
Date released
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
67
bed bed3+
3
bigWig
2
tsv
Organism
71
Homo sapiens
Biosample type
45
tissue
20
cell line
6
primary cell
Organ
764
epithelium
427
kidney
324
connective tissue
275
brain
200
pancreas
188
vasculature
165
musculature of body
143
heart
141
blood vessel
139
bodily fluid
134
blood
127
embryo
119
intestine
107
liver
103
limb
97
lung
97
skin of body
82
eye
71
large intestine
69
uterus
62
adipose tissue
52
artery
48
stomach
47
bone element
44
extraembryonic component
43
mammary gland
37
lymph node
37
prostate gland
33
penis
29
adrenal gland
26
small intestine
25
gonad
25
ureter
24
esophagus
24
placenta
18
spinal cord
16
nerve
16
vein
15
lymphatic vessel
15
spleen
15
thymus
14
testis
10
bone marrow
10
bronchus
10
ovary
10
thyroid gland
9
lymphoid tissue
9
skeleton
7
mouth
6
breast
5
trachea
4
tongue
4
urinary bladder
4
vagina
3
pituitary gland
1
nose
1
pericardium
Project
65
AMP
6
ENCODE
Genome assembly (visualization)
67
hg19
10
GRCh38
month_released!
September, 2022
May, 2021
BIOSAMPLE
TYPE
71 results
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Clear Filters
candidate regulatory elements
accessible chromatin
binding sites
target gene predictions
histone modifications
chromatin state
eQTL
gene expression
tissue
large intestine
15
1
1
sigmoid colon
5
1
1
transverse colon
4
1
1
colonic mucosa
2
1
1
mucosa of rectum
2
1
+ See 7 more…
cell line
HT-29
1
1
1
1
RKO
1
1
1
1
SW480
1
1
1
1
HCT-116 cell
1
2
HCT116
1
2
+ See 2 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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