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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
255
gene expression
214
accessible chromatin
92
differential activity
89
candidate regulatory elements
81
target gene predictions
49
binding sites
41
variant allelic effects
32
histone modifications
8
chromatin state
5
eQTL
2
caQTL
Date released
September, 2022
242
February, 2021
155
September, 2023
127
November, 2021
79
February, 2024
39
May, 2021
38
March, 2023
32
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
7
March, 2020
7
October, 2022
6
August, 2017
6
August, 2018
5
October, 2019
4
March, 2024
2
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
510
bed bed3+
326
tsv
173
bigWig
78
txt
13
bigBed narrowPeak
6
csv
2
bed bed9
2
bigBed bed9
Organism
868
Homo sapiens
Biosample type
686
primary cell
97
tissue
62
cell line
23
in vitro differentiated cells
Organ
798
epithelium
427
kidney
340
connective tissue
286
brain
233
pancreas
191
vasculature
171
musculature of body
147
heart
144
blood vessel
143
bodily fluid
138
blood
134
embryo
125
intestine
110
liver
106
limb
102
skin of body
101
lung
82
eye
76
large intestine
71
uterus
65
adipose tissue
54
artery
50
stomach
47
bone element
47
extraembryonic component
45
mammary gland
39
prostate gland
38
lymph node
34
penis
31
adrenal gland
27
small intestine
26
gonad
25
placenta
25
ureter
24
esophagus
19
spinal cord
17
vein
16
nerve
16
spleen
16
thymus
15
lymphatic vessel
14
testis
13
pituitary gland
11
ovary
11
thyroid gland
10
bone marrow
10
bronchus
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
557
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
515
hg19
189
GRCh38
month_released!
September, 2022
BIOSAMPLE
TYPE
868 results
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Clear Filters
gene expression
accessible chromatin
differential activity
candidate regulatory elements
target gene predictions
binding sites
variant allelic effects
histone modifications
chromatin state
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
2
1
2
4
epithelial cell of proximal tubule
16
1
1
1
1
pancreatic ductal cell
3
6
3
3
1
1
2
glomerular endothelial cell
14
2
1
1
+ See 143 more…
tissue
pigmented layer of retina
20
large intestine
1
15
1
1
sigmoid colon
1
5
2
transverse colon
1
4
1
1
breast epithelium
1
3
1
+ See 27 more…
cell line
EndoC_BH1
8
8
3
1
1
HT-29
1
1
1
1
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
SW480
1
1
1
1
+ See 12 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
pancreatic ductal cell
3
+ See 4 more…
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