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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
36
chromatin state
accessible chromatin
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
98
September, 2022
41
February, 2021
5
May, 2021
3
August, 2017
3
February, 2024
3
November, 2021
2
January, 2022
2
March, 2024
1
March, 2020
Available data
121
bed bed3+
33
bed bed9
2
tsv
Organism
158
Homo sapiens
Biosample type
130
tissue
25
cell line
3
primary cell
Organ
694
epithelium
595
kidney
408
brain
341
connective tissue
341
musculature of body
287
lung
262
intestine
224
heart
222
limb
209
vasculature
207
pancreas
190
embryo
skin of body
162
blood vessel
160
bodily fluid
158
large intestine
150
blood
134
extraembryonic component
119
liver
111
stomach
81
small intestine
80
adipose tissue
76
uterus
68
mammary gland
66
adrenal gland
66
bone element
66
placenta
65
prostate gland
60
ureter
58
artery
54
penis
46
thymus
44
eye
42
gonad
42
lymph node
41
esophagus
39
spinal cord
31
spleen
22
lymphoid tissue
22
nerve
21
ovary
21
testis
21
thyroid gland
18
mouth
18
vein
15
lymphatic vessel
13
pituitary gland
12
breast
11
bronchus
10
skeleton
10
vagina
9
bone marrow
9
tongue
9
urinary bladder
3
nose
2
trachea
1
pericardium
Project
155
AMP
3
ENCODE
Genome assembly (visualization)
154
hg19
40
GRCh38
organ_slims!
skin of body
annotation_type!
binding sites
accessible chromatin
BIOSAMPLE
TYPE
158 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
eQTL
gene expression
tissue
large intestine
27
14
13
1
sigmoid colon
10
7
5
transverse colon
8
5
4
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 6 more…
cell line
HCT116
2
3
1
HT-29
2
2
1
1
SW480
2
1
1
1
colon epithelial cell
1
1
1
RKO
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
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