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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
96
candidate regulatory elements
59
target gene predictions
49
chromatin state
accessible chromatin
14
binding sites
12
histone modifications
3
eQTL
3
gene expression
1
variant allelic effects
Date released
137
September, 2022
75
February, 2021
7
May, 2021
4
February, 2024
3
August, 2017
3
January, 2022
3
March, 2024
3
November, 2021
1
March, 2020
1
October, 2022
Available data
185
bed bed3+
46
bed bed9
3
tsv
Organism
237
Homo sapiens
Biosample type
145
tissue
79
cell line
13
primary cell
Organ
737
epithelium
602
kidney
424
brain
372
connective tissue
348
musculature of body
296
lung
268
intestine
230
vasculature
229
heart
224
limb
212
pancreas
206
bodily fluid
203
embryo
195
blood
191
skin of body
178
blood vessel
164
large intestine
137
extraembryonic component
132
liver
111
stomach
82
adipose tissue
81
small intestine
80
mammary gland
80
uterus
74
bone element
73
prostate gland
69
placenta
66
adrenal gland
64
artery
61
penis
ureter
54
lymph node
50
eye
47
thymus
45
gonad
41
esophagus
41
spinal cord
32
spleen
24
testis
22
lymphoid tissue
22
nerve
21
ovary
21
thyroid gland
21
vein
18
mouth
17
lymphatic vessel
13
bronchus
13
pituitary gland
12
breast
11
bone marrow
10
skeleton
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
234
AMP
3
ENCODE
Genome assembly (visualization)
231
hg19
54
GRCh38
organ_slims!
ureter
annotation_type!
accessible chromatin
BIOSAMPLE
TYPE
237 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
gene expression
variant allelic effects
tissue
large intestine
27
14
13
1
sigmoid colon
10
7
5
transverse colon
8
5
4
1
prostate gland
4
2
2
2
2
1
colonic mucosa
4
2
3
1
+ See 9 more…
cell line
22Rv1
4
2
2
1
1
HT-29
2
2
1
1
1
LNCaP clone FGC
3
2
2
HCT116
2
3
1
PC-3
2
1
1
1
1
+ See 13 more…
primary cell
epithelial cell of prostate
4
3
2
colon epithelial cell
3
luminal epithelial cell of prostatic duct
1
See all biosamples
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