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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
169
candidate regulatory elements
163
target gene predictions
155
accessible chromatin
99
chromatin state
95
gene expression
41
differential activity
39
binding sites
38
eQTL
35
histone modifications
25
variant allelic effects
11
Fine-mapped variants
2
pQTL
2
sQTL
2
variant to gene
1
caQTL
Date released
256
September, 2022
182
February, 2021
74
November, 2021
52
May, 2021
47
March, 2023
44
February, 2024
30
June, 2020
20
January, 2021
19
August, 2021
19
March, 2020
17
September, 2023
14
May, 2020
13
August, 2017
12
January, 2022
11
February, 2020
11
January, 2020
11
October, 2022
8
October, 2019
7
August, 2018
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2018
2
March, 2024
2
May, 2024
2
November, 2019
2
September, 2018
1
April, 2019
1
February, 2023
1
June, 2021
Available data
604
bed bed3+
134
tsv
108
bigWig
85
bed bed9
14
bigBed narrowPeak
7
txt
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
877
Homo sapiens
Biosample type
383
primary cell
341
tissue
99
cell line
53
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
757
AMP
74
ENCODE
20
T1D
15
KPMP
4
ITG
4
community
3
LungMap
Genome assembly (visualization)
720
hg19
218
GRCh38
2
hg18
organ_slims!
vasculature
BIOSAMPLE
TYPE
877 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
differential activity
binding sites
eQTL
histone modifications
variant allelic effects
Fine-mapped variants
pQTL
sQTL
variant to gene
caQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
10
1
pancreatic ductal cell
3
6
3
3
1
2
1
pancreatic beta cell
3
8
3
3
1
osteoblast
2
2
5
1
2
3
2
+ See 55 more…
tissue
large intestine
27
14
1
13
1
islet of Langerhans
1
6
3
11
2
13
1
1
2
2
2
adipose tissue
7
8
2
6
3
1
4
1
body of pancreas
8
5
4
2
1
1
3
sigmoid colon
10
7
1
5
+ See 28 more…
cell line
EndoC_BH1
1
8
8
3
1
HT-29
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
+ See 21 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
pancreatic ductal cell
3
fibroblast
1
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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