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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
37
candidate regulatory elements
11
target gene predictions
10
accessible chromatin
6
binding sites
5
histone modifications
3
chromatin state
2
eQTL
gene expression
Date released
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
1
March, 2020
1
October, 2022
Available data
72
bed bed3+
3
bigWig
Organism
74
Homo sapiens
Biosample type
46
tissue
22
cell line
6
primary cell
Organ
545
epithelium
291
connective tissue
267
brain
225
kidney
185
pancreas
160
musculature of body
155
vasculature
142
bodily fluid
137
blood
126
heart
124
embryo
122
intestine
119
blood vessel
101
limb
100
lung
100
skin of body
86
liver
81
eye
74
large intestine
69
uterus
52
adipose tissue
48
stomach
47
extraembryonic component
46
artery
45
mammary gland
43
bone element
38
lymph node
38
prostate gland
34
penis
30
adrenal gland
27
small intestine
25
placenta
25
ureter
24
gonad
22
esophagus
18
spinal cord
16
thymus
vein
15
spleen
14
nerve
13
testis
12
lymphatic vessel
12
pituitary gland
10
bone marrow
10
bronchus
10
ovary
10
thyroid gland
9
skeleton
8
lymphoid tissue
6
breast
6
mouth
5
trachea
3
tongue
3
urinary bladder
3
vagina
1
nose
Project
68
AMP
6
ENCODE
Genome assembly (visualization)
72
hg19
10
GRCh38
organ_slims!
vein
annotation_type!
gene expression
month_released!
September, 2022
BIOSAMPLE
TYPE
74 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
chromatin state
eQTL
tissue
large intestine
15
1
1
1
sigmoid colon
5
2
1
transverse colon
4
1
1
1
colonic mucosa
2
1
1
mucosa of rectum
2
1
+ See 5 more…
cell line
HT-29
1
1
1
1
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
SW480
1
1
1
1
HCT116
1
2
+ See 2 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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