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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
10
accessible chromatin
6
binding sites
5
histone modifications
3
chromatin state
eQTL
2
gene expression
Date released
65
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
2
March, 2024
1
March, 2020
1
October, 2022
Available data
137
bed bed3+
bed bed9
3
bigWig
2
tsv
Organism
139
Homo sapiens
Biosample type
103
tissue
30
cell line
6
primary cell
Organ
896
epithelium
571
kidney
398
connective tissue
371
brain
297
musculature of body
249
pancreas
240
lung
231
intestine
228
vasculature
203
heart
191
bodily fluid
189
limb
188
embryo
182
blood
171
blood vessel
167
skin of body
139
large intestine
134
liver
112
extraembryonic component
99
eye
95
stomach
78
uterus
75
bone element
73
mammary gland
68
adipose tissue
64
prostate gland
64
small intestine
62
artery
58
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
39
gonad
38
thymus
35
esophagus
33
spinal cord
27
spleen
20
testis
19
lymphatic vessel
19
lymphoid tissue
19
nerve
vein
18
ovary
18
thyroid gland
15
skeleton
14
bronchus
14
mouth
12
bone marrow
12
pituitary gland
10
breast
8
tongue
8
urinary bladder
7
vagina
5
trachea
3
nose
1
pericardium
Project
133
AMP
6
ENCODE
Genome assembly (visualization)
137
hg19
8
GRCh38
organ_slims!
vein
files.file_type!
bed bed9
annotation_type!
eQTL
BIOSAMPLE
TYPE
139 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
chromatin state
gene expression
tissue
large intestine
27
14
1
1
sigmoid colon
10
7
1
transverse colon
8
5
1
colonic mucosa
4
2
1
1
mucosa of rectum
4
2
1
+ See 6 more…
cell line
HT-29
2
2
1
1
1
SW480
2
1
1
1
1
HCT116
2
3
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
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