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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
262
candidate regulatory elements
260
gene expression
239
accessible chromatin
211
target gene predictions
138
chromatin state
92
differential activity
51
binding sites
49
variant allelic effects
35
histone modifications
10
eQTL
9
Fine-mapped variants
2
caQTL
Date released
384
September, 2022
300
February, 2021
155
September, 2023
127
November, 2021
79
February, 2024
42
May, 2021
38
June, 2020
38
March, 2023
25
May, 2020
23
August, 2021
21
January, 2020
20
January, 2021
16
March, 2020
15
February, 2020
15
November, 2022
12
February, 2023
7
April, 2020
7
October, 2022
6
August, 2017
6
August, 2018
5
March, 2024
5
October, 2019
4
January, 2022
3
November, 2019
2
May, 2019
2
May, 2022
1
July, 2020
Available data
851
bed bed3+
343
tsv
190
bigWig
132
bed bed9
78
txt
14
bigBed narrowPeak
6
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1358
Homo sapiens
Biosample type
820
primary cell
431
tissue
81
cell line
26
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1047
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
998
hg19
348
GRCh38
BIOSAMPLE
TYPE
1358 results
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Clear Filters
candidate regulatory elements
gene expression
accessible chromatin
target gene predictions
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
1
13
8
3
1
1
2
4
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
2
1
1
1
endothelial cell of umbilical vein
6
2
4
5
2
1
+ See 147 more…
tissue
muscle of arm
33
1
16
16
1
muscle of leg
27
2
14
15
large intestine
27
1
14
13
1
tibial nerve
6
2
3
3
4
2
2
3
sigmoid colon
10
1
7
5
+ See 50 more…
cell line
EndoC_BH1
8
8
1
3
1
HT-29
2
1
2
1
1
1
GM23248
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
+ See 14 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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