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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
87
candidate regulatory elements
69
accessible chromatin
53
target gene predictions
45
chromatin state
12
binding sites
9
histone modifications
2
variant allelic effects
Date released
125
September, 2022
63
February, 2021
24
February, 2023
22
November, 2022
13
June, 2020
10
November, 2021
5
May, 2021
4
February, 2024
3
August, 2017
3
October, 2022
2
January, 2020
2
May, 2020
1
March, 2020
Available data
235
bed bed3+
42
bed bed9
39
bigWig
Organism
277
Homo sapiens
Biosample type
198
tissue
44
cell line
29
primary cell
6
in vitro differentiated cells
Organ
600
epithelium
423
brain
387
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
229
heart
217
bodily fluid
206
blood
205
embryo
204
vasculature
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
124
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
267
AMP
10
ENCODE
Genome assembly (visualization)
277
hg19
59
GRCh38
BIOSAMPLE
TYPE
277 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
binding sites
histone modifications
variant allelic effects
tissue
large intestine
27
1
14
13
1
retina
6
23
3
3
1
1
1
sigmoid colon
10
1
7
5
pigmented layer of retina
20
transverse colon
8
1
5
4
+ See 8 more…
cell line
HT-29
2
1
2
1
1
1
WERI-Rb-1
2
1
1
1
2
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
+ See 6 more…
primary cell
retinal pigment epithelial cell
2
3
1
1
2
1
colon epithelial cell
3
3
iris pigment epithelial cell
2
1
1
1
fibroblast of the conjunctiva
2
1
1
Muller cell
2
+ See 2 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
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