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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
372
candidate regulatory elements
215
gene expression
198
target gene predictions
185
chromatin state
87
accessible chromatin
57
differential activity
23
variant allelic effects
20
binding sites
18
histone modifications
13
eQTL
6
Fine-mapped variants
2
caQTL
Date released
524
September, 2022
325
February, 2021
140
September, 2023
29
August, 2021
28
June, 2020
24
May, 2020
20
November, 2021
19
February, 2024
19
January, 2020
15
February, 2020
13
March, 2020
11
May, 2021
6
March, 2024
6
October, 2022
5
August, 2017
4
January, 2022
3
May, 2019
3
May, 2022
1
April, 2019
1
October, 2019
Available data
723
bed bed3+
267
tsv
180
bed bed9
87
txt
55
bigWig
5
bigBed bed9
Organism
1196
Homo sapiens
Biosample type
736
tissue
365
primary cell
92
cell line
3
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1036
AMP
140
KPMP
20
ENCODE
Genome assembly (visualization)
919
hg19
243
GRCh38
BIOSAMPLE
TYPE
1196 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
differential activity
variant allelic effects
binding sites
histone modifications
eQTL
Fine-mapped variants
caQTL
tissue
kidney
29
7
14
16
10
1
1
2
1
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
large intestine
27
14
13
1
1
muscle of back
28
13
13
+ See 48 more…
primary cell
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
skeletal muscle satellite cell
2
2
2
2
5
glomerular visceral epithelial cell
2
5
1
1
2
kidney tubule cell
3
1
2
2
2
+ See 73 more…
cell line
HEK293
3
1
1
1
2
1
HT-29
2
2
1
1
1
1
LHCN-M2
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
+ See 18 more…
in vitro differentiated cells
myotube
1
1
renal cell carcinoma
1
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