Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
163
candidate regulatory elements
92
target gene predictions
86
chromatin state
30
accessible chromatin
8
binding sites
8
variant allelic effects
7
eQTL
7
gene expression
7
histone modifications
Date released
236
September, 2022
104
February, 2021
13
June, 2020
March, 2020
10
May, 2020
8
May, 2021
7
January, 2020
6
February, 2020
6
November, 2021
4
January, 2022
3
August, 2017
3
February, 2024
3
March, 2024
2
May, 2019
2
November, 2019
1
October, 2022
Available data
311
bed bed3+
83
bed bed9
17
bigWig
10
tsv
4
bigBed bed9
Organism
408
Homo sapiens
Biosample type
360
tissue
41
cell line
7
primary cell
Organ
943
epithelium
649
kidney
449
connective tissue
428
brain
366
musculature of body
310
lung
287
intestine
268
pancreas
254
vasculature
240
heart
235
limb
218
bodily fluid
214
embryo
207
blood
204
skin of body
192
blood vessel
173
large intestine
146
extraembryonic component
146
liver
118
stomach
109
eye
89
bone element
87
mammary gland
83
small intestine
83
uterus
81
adipose tissue
78
prostate gland
73
placenta
72
adrenal gland
69
artery
64
penis
64
ureter
62
lymph node
49
gonad
48
thymus
44
esophagus
40
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
thyroid gland
22
nerve
22
ovary
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
1
pericardium
Project
402
AMP
6
ENCODE
Genome assembly (visualization)
397
hg19
112
GRCh38
month_released!
March, 2020
BIOSAMPLE
TYPE
408 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
variant allelic effects
eQTL
gene expression
histone modifications
tissue
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
large intestine
27
14
13
1
1
sigmoid colon
10
6
5
1
tibial nerve
6
3
4
3
2
2
2
+ See 30 more…
cell line
HT-29
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
+ See 4 more…
primary cell
colon epithelial cell
3
3
fibroblast of arm
1
See all biosamples
Download