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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
97
candidate regulatory elements
57
target gene predictions
51
chromatin state
18
binding sites
11
accessible chromatin
10
histone modifications
2
eQTL
2
gene expression
1
variant allelic effects
Date released
140
September, 2022
74
February, 2021
11
June, 2020
7
May, 2021
4
August, 2017
4
February, 2024
4
October, 2022
2
January, 2022
2
March, 2024
1
March, 2020
Available data
198
bed bed3+
47
bed bed9
2
tsv
Organism
249
Homo sapiens
Biosample type
136
tissue
70
cell line
40
primary cell
3
in vitro differentiated cells
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
249
AMP
12
ENCODE
Genome assembly (visualization)
245
hg19
51
GRCh38
BIOSAMPLE
TYPE
249 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
eQTL
gene expression
variant allelic effects
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 8 more…
cell line
MCF-7
9
6
5
3
1
2
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
T47D
3
2
2
HCT116
2
3
1
+ See 6 more…
primary cell
mammary gland epithelial cell
3
3
3
1
1
mammary epithelial cell
3
1
1
4
1
fibroblast of mammary gland
2
1
1
2
1
1
myoepithelial cell of mammary gland
4
2
2
luminal epithelial cell of mammary gland
1
1
1
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
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