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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
174
candidate regulatory elements
138
target gene predictions
98
accessible chromatin
98
chromatin state
49
gene expression
47
binding sites
34
histone modifications
22
eQTL
12
differential activity
9
variant allelic effects
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
257
September, 2022
180
February, 2021
62
November, 2021
30
June, 2020
23
May, 2021
February, 2024
17
September, 2023
15
October, 2022
11
August, 2017
11
August, 2021
10
January, 2020
10
March, 2020
10
May, 2020
9
February, 2020
8
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
515
bed bed3+
87
bed bed9
65
tsv
59
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
691
Homo sapiens
Biosample type
313
primary cell
226
tissue
99
cell line
52
in vitro differentiated cells
1
stem cell
Organ
873
epithelium
651
kidney
465
brain
442
connective tissue
360
musculature of body
310
lung
283
intestine
252
pancreas
250
heart
249
vasculature
244
limb
203
skin of body
190
bodily fluid
189
blood vessel
179
blood
171
large intestine
164
embryo
146
extraembryonic component
127
liver
117
stomach
108
eye
89
bone element
87
adipose tissue
86
mammary gland
84
small intestine
77
prostate gland
75
artery
73
placenta
72
adrenal gland
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
32
uterus
26
testis
25
nerve
23
lymphoid tissue
23
ovary
23
vein
22
thyroid gland
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
603
AMP
62
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
616
hg19
180
GRCh38
2
hg18
month_released!
February, 2024
BIOSAMPLE
TYPE
691 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
pericyte cell
1
10
10
1
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
+ See 49 more…
tissue
large intestine
26
14
1
13
1
adipose tissue
7
8
2
6
3
1
4
1
sigmoid colon
10
7
1
5
subcutaneous adipose tissue
2
2
1
5
6
1
3
transverse colon
8
5
1
4
1
+ See 18 more…
cell line
MCF-7
9
6
1
5
3
2
HT-29
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
SW480
2
1
1
1
1
1
T47D
3
2
2
+ See 18 more…
in vitro differentiated cells
adipocyte
4
6
3
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
mammary gland epithelial cell
1
1
1
fibroblast
1
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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