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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
103
candidate regulatory elements
66
target gene predictions
55
chromatin state
20
accessible chromatin
18
binding sites
10
histone modifications
4
eQTL
4
gene expression
3
Fine-mapped variants
3
variant allelic effects
Date released
149
September, 2022
77
February, 2021
12
June, 2020
12
November, 2021
7
May, 2021
4
August, 2017
4
February, 2024
4
March, 2020
4
October, 2022
3
February, 2020
3
January, 2022
3
May, 2020
2
March, 2024
1
January, 2020
1
November, 2019
Available data
224
bed bed3+
51
bed bed9
8
bigWig
8
tsv
1
bigBed bed9
Organism
286
Homo sapiens
Biosample type
161
tissue
70
cell line
52
primary cell
3
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
274
AMP
12
ENCODE
Genome assembly (visualization)
279
hg19
74
GRCh38
BIOSAMPLE
TYPE
286 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
Fine-mapped variants
variant allelic effects
tissue
large intestine
27
14
13
1
1
tibial nerve
6
3
4
3
2
2
3
2
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
+ See 9 more…
cell line
MCF-7
9
6
5
1
3
2
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
T47D
3
2
2
HCT116
2
3
1
+ See 6 more…
primary cell
mammary gland epithelial cell
3
4
3
1
1
1
mammary epithelial cell
3
1
1
1
4
fibroblast of mammary gland
2
1
1
1
2
1
myoepithelial cell of mammary gland
4
2
2
luminal epithelial cell of mammary gland
1
3
1
2
+ See 1 more…
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
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