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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
124
candidate regulatory elements
78
target gene predictions
64
chromatin state
26
binding sites
22
accessible chromatin
17
histone modifications
3
eQTL
3
gene expression
2
variant allelic effects
Date released
179
September, 2022
103
February, 2021
16
June, 2020
12
November, 2021
9
May, 2021
5
February, 2024
4
August, 2017
4
October, 2022
3
January, 2022
3
March, 2024
1
March, 2020
Available data
273
bed bed3+
60
bed bed9
6
bigWig
3
tsv
Organism
339
Homo sapiens
Biosample type
151
tissue
123
cell line
62
primary cell
3
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
327
AMP
12
ENCODE
Genome assembly (visualization)
333
hg19
77
GRCh38
BIOSAMPLE
TYPE
339 results
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candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
eQTL
gene expression
variant allelic effects
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
prostate gland
4
2
2
2
1
2
1
colonic mucosa
4
2
3
1
+ See 10 more…
cell line
MCF-7
9
6
5
3
1
2
22Rv1
4
2
2
1
1
HT-29
2
2
1
1
1
1
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
1
+ See 16 more…
primary cell
mammary gland epithelial cell
3
4
3
1
1
1
mammary epithelial cell
3
1
1
4
1
epithelial cell of prostate
4
3
2
fibroblast of mammary gland
2
1
1
2
1
1
myoepithelial cell of mammary gland
4
2
2
+ See 3 more…
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
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