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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
270
candidate regulatory elements
207
target gene predictions
136
chromatin state
49
accessible chromatin
26
binding sites
23
gene expression
23
histone modifications
9
eQTL
7
variant allelic effects
6
Fine-mapped variants
2
caQTL
1
differential activity
Date released
380
September, 2022
190
February, 2021
69
February, 2024
23
June, 2020
19
November, 2021
18
May, 2021
11
March, 2020
9
August, 2021
6
August, 2017
6
February, 2020
5
January, 2020
5
May, 2020
5
October, 2022
4
March, 2024
3
January, 2022
3
May, 2022
2
May, 2019
1
October, 2019
Available data
592
bed bed3+
130
bed bed9
26
tsv
21
bigWig
3
bigBed bed9
Organism
759
Homo sapiens
Biosample type
470
tissue
178
cell line
78
primary cell
32
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
740
AMP
19
ENCODE
Genome assembly (visualization)
737
hg19
218
GRCh38
BIOSAMPLE
TYPE
759 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
gene expression
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
caQTL
differential activity
tissue
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
large intestine
27
14
13
1
1
muscle of back
28
13
13
sigmoid colon
10
7
5
1
+ See 34 more…
cell line
H1-hESC
1
39
1
1
2
8
1
H9
7
8
1
HT-29
2
2
1
1
1
1
LHCN-M2
2
1
1
1
1
1
SW480
2
1
1
1
1
1
+ See 25 more…
primary cell
trophoblast cell
7
5
4
1
1
skeletal muscle satellite cell
2
2
2
5
2
skeletal muscle fiber
5
2
2
type I muscle cell
1
3
1
1
1
type II muscle cell
1
3
1
1
1
+ See 9 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
cardiac mesoderm primordium
1
1
1
+ See 4 more…
stem cell
H1-hESC
1
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