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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
75
candidate regulatory elements
47
target gene predictions
8
accessible chromatin
6
binding sites
5
histone modifications
3
chromatin state
2
variant allelic effects
Date released
71
September, 2022
49
February, 2021
8
June, 2020
5
May, 2021
3
August, 2017
3
February, 2024
3
November, 2021
2
May, 2020
1
March, 2020
1
October, 2022
Available data
151
bed bed3+
37
bed bed9
8
tsv
bigWig
1
bigBed bed9
Organism
146
Homo sapiens
Biosample type
113
tissue
30
cell line
3
primary cell
Organ
382
epithelium
288
brain
275
connective tissue
274
kidney
265
musculature of body
230
lung
217
intestine
190
bodily fluid
181
blood
176
embryo
161
limb
160
skin of body
152
heart
137
vasculature
134
large intestine
109
extraembryonic component
105
blood vessel
104
pancreas
88
stomach
87
liver
75
uterus
70
mammary gland
63
prostate gland
62
eye
62
small intestine
60
bone element
54
lymph node
54
penis
54
placenta
51
adrenal gland
48
ureter
44
adipose tissue
38
artery
37
thymus
36
gonad
31
esophagus
29
spinal cord
25
spleen
19
testis
18
lymphoid tissue
16
ovary
16
thyroid gland
16
vein
13
mouth
12
bronchus
12
nerve
11
lymphatic vessel
11
pituitary gland
9
bone marrow
9
breast
7
skeleton
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
143
AMP
3
ENCODE
Genome assembly (visualization)
146
hg19
5
GRCh38
files.file_type!
bigWig
BIOSAMPLE
TYPE
146 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
chromatin state
variant allelic effects
tissue
large intestine
27
14
1
1
sigmoid colon
10
7
1
transverse colon
8
5
1
tibial nerve
6
3
1
2
colonic mucosa
4
2
1
1
+ See 5 more…
cell line
HT-29
2
2
1
1
1
SW480
2
1
1
1
1
HCT116
2
3
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
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