Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
75
candidate regulatory elements
47
target gene predictions
40
chromatin state
13
accessible chromatin
5
binding sites
5
histone modifications
4
eQTL
4
gene expression
3
Fine-mapped variants
2
variant allelic effects
Date released
107
September, 2022
49
February, 2021
8
June, 2020
6
November, 2021
5
May, 2021
4
March, 2020
3
August, 2017
3
February, 2020
3
February, 2024
3
January, 2022
3
May, 2020
2
March, 2024
1
January, 2020
1
November, 2019
October, 2022
Available data
150
bed bed3+
37
bed bed9
8
tsv
5
bigWig
1
bigBed bed9
Organism
198
Homo sapiens
Biosample type
159
tissue
33
cell line
6
primary cell
Organ
943
epithelium
650
kidney
460
brain
448
connective tissue
372
musculature of body
307
lung
288
intestine
277
pancreas
262
vasculature
255
heart
244
limb
214
embryo
202
blood vessel
200
skin of body
199
bodily fluid
188
blood
173
large intestine
155
liver
145
extraembryonic component
119
stomach
107
eye
89
adipose tissue
88
bone element
84
mammary gland
84
small intestine
82
uterus
78
prostate gland
74
artery
73
adrenal gland
72
placenta
64
ureter
62
penis
60
lymph node
49
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
25
nerve
25
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
192
AMP
6
ENCODE
Genome assembly (visualization)
191
hg19
54
GRCh38
organ_slims!
lymphatic vessel
month_released!
October, 2022
BIOSAMPLE
TYPE
198 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
Fine-mapped variants
variant allelic effects
tissue
large intestine
27
14
13
1
1
tibial nerve
6
3
4
3
2
2
3
2
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
+ See 8 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
RKO
1
1
1
1
HCT-116 cell
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
Download