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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
84
candidate regulatory elements
51
target gene predictions
44
chromatin state
16
accessible chromatin
9
binding sites
6
eQTL
6
histone modifications
5
gene expression
3
Fine-mapped variants
2
variant allelic effects
Date released
119
September, 2022
57
February, 2021
11
June, 2020
6
November, 2021
5
January, 2022
5
May, 2021
4
March, 2020
3
August, 2017
3
February, 2020
3
February, 2024
3
March, 2024
3
May, 2020
2
October, 2022
1
January, 2020
1
November, 2019
Available data
171
bed bed3+
41
bed bed9
9
tsv
5
bigWig
1
bigBed bed9
Organism
226
Homo sapiens
Biosample type
177
tissue
41
cell line
8
primary cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
220
AMP
6
ENCODE
Genome assembly (visualization)
216
hg19
60
GRCh38
organ_slims!
ovary
BIOSAMPLE
TYPE
226 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
eQTL
histone modifications
gene expression
Fine-mapped variants
variant allelic effects
tissue
large intestine
27
14
13
1
1
tibial nerve
6
3
4
3
2
2
3
2
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
testis
7
3
3
1
1
1
1
1
+ See 9 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
NT2-D1 cell
1
1
1
1
2
HCT-116 cell
1
1
2
+ See 5 more…
primary cell
colon epithelial cell
3
3
Leydig cell
1
somatic gonadal cell
1
See all biosamples
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