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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
144
candidate regulatory elements
113
target gene predictions
74
chromatin state
58
binding sites
34
histone modifications
33
accessible chromatin
4
eQTL
3
gene expression
Date released
206
September, 2022
153
February, 2021
31
February, 2024
22
June, 2020
22
October, 2022
10
May, 2021
6
November, 2021
5
August, 2017
3
March, 2024
2
August, 2021
2
January, 2022
1
March, 2020
Available data
387
bed bed3+
69
bed bed9
11
bigWig
3
tsv
Organism
463
Homo sapiens
Biosample type
244
cell line
157
tissue
56
primary cell
6
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
457
AMP
6
ENCODE
Genome assembly (visualization)
458
hg19
115
GRCh38
BIOSAMPLE
TYPE
463 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
eQTL
gene expression
cell line
K562
7
23
7
2
1
1
GM12878
2
8
2
2
1
1
GM06990
2
1
1
2
1
1
GM19240
1
2
1
2
1
1
HAP-1
2
2
1
1
1
1
+ See 35 more…
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 21 more…
primary cell
foreskin keratinocyte
11
4
4
foreskin fibroblast
6
2
1
4
2
1
colon epithelial cell
3
3
foreskin melanocyte
4
1
1
peripheral blood mononuclear cell
4
1
1
+ See 1 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
foreskin melanocyte
1
1
1
See all biosamples
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