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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
120
candidate regulatory elements
target gene predictions
60
chromatin state
18
accessible chromatin
6
binding sites
6
histone modifications
4
gene expression
3
eQTL
2
variant allelic effects
Date released
111
September, 2022
75
February, 2021
10
June, 2020
8
November, 2021
4
August, 2017
4
March, 2024
3
February, 2024
3
January, 2022
1
October, 2022
Available data
156
bed bed3+
56
bed bed9
8
bigWig
4
tsv
Organism
219
Homo sapiens
Biosample type
183
tissue
26
cell line
10
primary cell
Organ
827
epithelium
577
kidney
390
brain
382
connective tissue
295
musculature of body
235
vasculature
233
lung
233
pancreas
216
intestine
206
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
135
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
vein
18
lymphatic vessel
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
211
AMP
8
ENCODE
Genome assembly (visualization)
212
hg19
67
GRCh38
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
219 results
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Clear Filters
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
eQTL
variant allelic effects
tissue
stomach
40
19
3
1
1
1
large intestine
27
13
1
1
sigmoid colon
10
5
1
transverse colon
8
4
1
1
colonic mucosa
4
3
1
+ See 12 more…
cell line
HT-29
2
1
1
1
1
SW480
2
1
1
1
1
RKO
1
1
1
1
HCT-116 cell
1
2
HCT116
2
1
+ See 3 more…
primary cell
colon epithelial cell
3
parietal cell
1
1
peptic cell
1
1
foveolar cell of stomach
1
gastric goblet cell
1
+ See 1 more…
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