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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
89
candidate regulatory elements
58
target gene predictions
47
chromatin state
12
accessible chromatin
7
binding sites
6
histone modifications
2
eQTL
Date released
131
September, 2022
57
February, 2021
8
June, 2020
7
November, 2021
6
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
2
March, 2020
1
May, 2020
1
October, 2022
Available data
175
bed bed3+
44
bed bed9
4
bigWig
tsv
Organism
221
Homo sapiens
Biosample type
180
tissue
34
cell line
7
primary cell
Organ
625
epithelium
401
kidney
399
brain
395
connective tissue
361
musculature of body
310
lung
286
intestine
227
limb
226
heart
217
bodily fluid
206
blood
205
embryo
202
skin of body
202
vasculature
201
pancreas
172
large intestine
157
blood vessel
146
extraembryonic component
128
liver
117
stomach
107
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
67
adipose tissue
64
penis
64
ureter
62
lymph node
59
artery
49
thymus
48
gonad
43
esophagus
38
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
nerve
18
mouth
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
214
AMP
7
ENCODE
Genome assembly (visualization)
219
hg19
55
GRCh38
files.file_type!
tsv
BIOSAMPLE
TYPE
221 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
tissue
large intestine
27
14
13
1
1
thymus
20
14
11
1
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
+ See 6 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
fetal thymocyte
1
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