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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
40
candidate regulatory elements
12
accessible chromatin
11
target gene predictions
9
binding sites
6
chromatin state
6
histone modifications
3
gene expression
2
eQTL
1
variant allelic effects
Date released
September, 2022
53
February, 2021
8
June, 2020
6
May, 2021
6
November, 2021
4
August, 2017
February, 2024
3
March, 2024
2
January, 2020
2
January, 2022
2
March, 2020
2
May, 2020
2
October, 2022
Available data
82
bed bed3+
4
bigWig
3
tsv
2
bed bed9
2
bigBed bed9
Organism
90
Homo sapiens
Biosample type
48
tissue
22
cell line
20
primary cell
Organ
722
epithelium
426
kidney
322
connective tissue
285
brain
208
pancreas
174
vasculature
156
musculature of body
142
heart
129
blood vessel
119
intestine
115
bodily fluid
110
blood
106
limb
101
skin of body
100
lung
83
embryo
81
eye
81
liver
73
large intestine
63
adipose tissue
54
artery
48
stomach
47
bone element
47
extraembryonic component
44
mammary gland
38
lymph node
38
prostate gland
34
penis
30
adrenal gland
27
small intestine
26
gonad
25
placenta
25
ureter
22
esophagus
20
uterus
19
spinal cord
17
vein
16
nerve
16
spleen
16
thymus
15
lymphatic vessel
14
testis
13
pituitary gland
11
ovary
10
bone marrow
10
thyroid gland
9
bronchus
9
skeleton
8
lymphoid tissue
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
84
AMP
6
ENCODE
Genome assembly (visualization)
84
hg19
11
GRCh38
month_released!
February, 2024
September, 2022
BIOSAMPLE
TYPE
90 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
binding sites
chromatin state
histone modifications
gene expression
eQTL
variant allelic effects
tissue
large intestine
14
1
1
1
sigmoid colon
5
1
2
transverse colon
4
1
1
1
colonic mucosa
2
1
1
mucosa of rectum
2
1
+ See 8 more…
cell line
HT-29
1
1
1
1
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
SW480
1
1
1
1
vein endothelial cell
1
1
+ See 3 more…
primary cell
endothelial cell of umbilical vein
4
2
2
2
3
1
colon epithelial cell
3
3
See all biosamples
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