Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
134
candidate regulatory elements
102
target gene predictions
72
chromatin state
binding sites
29
accessible chromatin
26
histone modifications
6
Fine-mapped variants
6
variant allelic effects
5
eQTL
5
gene expression
Date released
201
September, 2022
99
February, 2021
28
February, 2024
17
June, 2020
7
May, 2020
7
May, 2021
6
March, 2020
5
February, 2020
5
January, 2020
2
August, 2017
2
August, 2021
2
March, 2024
2
May, 2019
1
January, 2022
1
November, 2019
Available data
299
bed bed3+
70
bed bed9
13
tsv
12
bigWig
3
bigBed bed9
Organism
385
Homo sapiens
Biosample type
219
tissue
158
cell line
8
primary cell
Organ
906
epithelium
645
kidney
450
brain
429
connective tissue
368
musculature of body
302
lung
283
intestine
272
pancreas
250
heart
245
vasculature
242
limb
202
embryo
188
blood vessel
186
skin of body
172
bodily fluid
168
large intestine
162
blood
143
extraembryonic component
143
liver
119
stomach
103
eye
87
adipose tissue
84
small intestine
81
bone element
79
uterus
75
mammary gland
73
adrenal gland
70
placenta
70
prostate gland
artery
64
ureter
57
penis
50
lymph node
48
thymus
47
gonad
45
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
ovary
23
testis
23
thyroid gland
20
vein
19
lymphatic vessel
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
385
AMP
Genome assembly (visualization)
379
hg19
119
GRCh38
annotation_type!
binding sites
organ_slims!
artery
BIOSAMPLE
TYPE
385 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
Fine-mapped variants
variant allelic effects
eQTL
gene expression
tissue
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
tibial nerve
6
3
4
3
3
2
2
2
gastrocnemius medialis
8
5
4
1
lower leg skin
6
2
2
+ See 19 more…
cell line
K562
7
23
7
1
1
GM12878
2
8
2
1
1
HAP-1
2
2
1
1
1
NAMALWA cell
2
2
2
1
OCI-LY7
2
2
1
1
1
+ See 24 more…
primary cell
peripheral blood mononuclear cell
4
1
peripheral blood stem cell
1
1
fibroblast of arm
1
See all biosamples
Download