Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
163
candidate regulatory elements
93
target gene predictions
86
chromatin state
30
accessible chromatin
9
Fine-mapped variants
8
binding sites
variant allelic effects
7
eQTL
7
gene expression
7
histone modifications
Date released
236
September, 2022
104
February, 2021
13
June, 2020
10
March, 2020
8
May, 2021
7
January, 2020
6
February, 2020
6
November, 2021
4
January, 2022
3
August, 2017
3
February, 2024
3
March, 2024
2
May, 2019
2
May, 2020
2
November, 2019
1
October, 2022
Available data
304
bed bed3+
83
bed bed9
19
tsv
17
bigWig
4
bigBed bed9
Organism
410
Homo sapiens
Biosample type
362
tissue
41
cell line
7
primary cell
Organ
908
epithelium
636
kidney
449
brain
442
connective tissue
368
musculature of body
310
lung
286
intestine
266
pancreas
251
vasculature
245
heart
236
limb
218
bodily fluid
215
embryo
207
blood
203
skin of body
195
blood vessel
174
large intestine
152
liver
146
extraembryonic component
117
stomach
107
eye
89
bone element
86
adipose tissue
86
mammary gland
84
small intestine
83
uterus
77
prostate gland
73
placenta
72
adrenal gland
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
nerve
23
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
404
AMP
6
ENCODE
Genome assembly (visualization)
399
hg19
121
GRCh38
annotation_type!
variant allelic effects
BIOSAMPLE
TYPE
410 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
Fine-mapped variants
binding sites
eQTL
gene expression
histone modifications
tissue
muscle of arm
33
16
16
1
muscle of leg
27
14
15
2
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
tibial nerve
6
3
4
3
3
2
2
+ See 29 more…
cell line
HT-29
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
+ See 4 more…
primary cell
colon epithelial cell
3
3
fibroblast of arm
1
See all biosamples
Download