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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
272
gene expression
243
accessible chromatin
215
candidate regulatory elements
186
target gene predictions
119
chromatin state
97
differential activity
58
variant allelic effects
50
binding sites
33
histone modifications
15
Fine-mapped variants
12
eQTL
5
caQTL
Date released
322
September, 2022
275
February, 2021
165
September, 2023
127
November, 2021
79
February, 2024
39
May, 2021
38
March, 2023
32
June, 2020
32
May, 2020
30
January, 2020
24
August, 2021
23
March, 2020
20
January, 2021
18
February, 2020
16
February, 2023
15
November, 2022
8
October, 2022
7
April, 2020
7
October, 2019
6
August, 2018
5
November, 2019
4
January, 2022
4
March, 2024
3
August, 2017
3
May, 2019
2
May, 2022
1
July, 2020
Available data
789
bed bed3+
367
tsv
201
bigWig
116
bed bed9
80
txt
14
bigBed narrowPeak
11
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1305
Homo sapiens
Biosample type
863
primary cell
362
tissue
54
cell line
26
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
984
AMP
165
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
925
hg19
351
GRCh38
BIOSAMPLE
TYPE
1305 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
1
3
1
2
1
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
1
2
+ See 157 more…
tissue
muscle of arm
1
33
16
16
1
muscle of leg
2
27
14
15
tibial nerve
2
3
6
3
4
2
3
2
coronary artery
1
3
3
3
3
2
3
2
1
pigmented layer of retina
20
+ See 46 more…
cell line
EndoC_BH1
8
8
1
3
1
GM23248
1
2
1
1
1
1
keratinocyte
3
1
smooth muscle cell of the coronary artery
1
1
1
1
choroid plexus epithelial cell
1
1
1
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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