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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
accessible chromatin
21
candidate regulatory elements
21
gene expression
20
target gene predictions
16
chromatin state
14
histone modifications
13
binding sites
8
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
43
September, 2022
24
February, 2021
17
February, 2024
10
August, 2021
10
March, 2020
4
March, 2023
3
August, 2017
3
May, 2020
3
May, 2021
2
February, 2020
1
January, 2020
1
January, 2022
1
July, 2020
1
May, 2022
1
November, 2021
1
October, 2022
Available data
74
bed bed3+
25
tsv
13
bed bed9
9
bigWig
1
bam
1
bigBed bed9
Organism
125
Homo sapiens
Biosample type
54
tissue
46
primary cell
25
cell line
in vitro differentiated cells
Organ
720
epithelium
602
kidney
421
brain
346
musculature of body
332
connective tissue
296
lung
268
intestine
229
vasculature
228
heart
224
limb
209
pancreas
206
bodily fluid
195
blood
186
skin of body
178
blood vessel
173
embryo
164
large intestine
132
extraembryonic component
125
liver
111
stomach
81
adipose tissue
81
small intestine
80
uterus
78
mammary gland
74
bone element
73
prostate gland
69
placenta
66
adrenal gland
64
artery
60
ureter
57
penis
54
lymph node
50
eye
47
thymus
45
gonad
41
esophagus
41
spinal cord
32
spleen
24
testis
22
lymphoid tissue
22
nerve
21
ovary
21
thyroid gland
21
vein
18
mouth
16
lymphatic vessel
13
bronchus
13
pituitary gland
12
breast
11
bone marrow
10
skeleton
10
vagina
9
tongue
9
urinary bladder
4
trachea
1
pericardium
Project
124
AMP
1
ENCODE
Genome assembly (visualization)
96
hg19
41
GRCh38
2
hg18
annotation_type!
accessible chromatin
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
125 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
histone modifications
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
tissue
liver
13
1
10
9
2
1
7
1
1
right lobe of liver
2
1
1
1
1
3
primary cell
hepatocyte
1
13
3
1
4
1
2
endothelial cell of hepatic sinusoid
4
6
hepatic stellate cell
1
1
1
1
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
cell line
HepG2
2
3
2
5
3
HuH-7
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
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