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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
accessible chromatin
102
candidate regulatory elements
98
target gene predictions
72
gene expression
64
chromatin state
43
binding sites
37
histone modifications
27
eQTL
19
variant allelic effects
18
differential activity
9
Fine-mapped variants
3
caQTL
2
pQTL
Date released
163
September, 2022
129
February, 2021
32
February, 2024
21
August, 2021
19
March, 2020
19
May, 2021
19
November, 2021
17
September, 2023
13
October, 2022
12
May, 2020
11
February, 2020
11
March, 2023
10
August, 2017
7
January, 2022
2
January, 2020
1
August, 2018
1
February, 2023
1
January, 2018
1
January, 2021
1
July, 2020
1
May, 2022
1
November, 2020
1
October, 2019
Available data
314
bed bed3+
90
tsv
54
bed bed9
9
bigWig
7
txt
3
bigBed bed9
3
csv
1
bam
Organism
494
Homo sapiens
Biosample type
259
primary cell
141
tissue
48
cell line
45
in vitro differentiated cells
1
stem cell
Organ
737
epithelium
602
kidney
424
brain
370
connective tissue
348
musculature of body
296
lung
268
intestine
230
vasculature
229
heart
224
limb
212
pancreas
206
bodily fluid
203
embryo
195
blood
191
skin of body
178
blood vessel
164
large intestine
137
extraembryonic component
132
liver
111
stomach
82
adipose tissue
81
small intestine
80
mammary gland
80
uterus
74
bone element
73
prostate gland
69
placenta
66
adrenal gland
64
artery
61
penis
60
ureter
54
lymph node
50
eye
47
thymus
45
gonad
41
esophagus
41
spinal cord
32
spleen
24
testis
22
lymphoid tissue
22
nerve
21
ovary
21
thyroid gland
21
vein
18
mouth
17
lymphatic vessel
13
bronchus
13
pituitary gland
12
breast
11
bone marrow
10
skeleton
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
455
AMP
19
ENCODE
15
KPMP
4
ITG
1
T1D
Genome assembly (visualization)
393
hg19
115
GRCh38
4
hg18
annotation_type!
accessible chromatin
BIOSAMPLE
TYPE
494 results
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Clear Filters
candidate regulatory elements
target gene predictions
gene expression
chromatin state
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
hepatocyte
1
3
13
1
1
4
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
4
2
fibroblast
4
1
2
6
fibroblast of dermis
4
4
3
1
+ See 45 more…
tissue
liver
13
10
1
9
1
2
7
1
1
adipose tissue
7
8
3
6
1
4
1
subcutaneous adipose tissue
2
5
1
6
1
1
3
omental fat pad
5
2
2
2
2
3
right lobe of liver
2
1
1
1
1
3
+ See 7 more…
cell line
HepG2
2
3
2
3
5
GM23248
2
1
1
1
1
HuH-7
1
1
1
1
1
HT1080
2
1
1
HuH-7.5
1
1
1
+ See 7 more…
in vitro differentiated cells
adipocyte
4
6
1
6
1
1
mesenchymal stem cell
3
3
2
1
1
hepatocyte
2
1
1
hepatocyte(AFP)
3
fibroblast
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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