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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
21
accessible chromatin
20
gene expression
19
candidate regulatory elements
14
target gene predictions
13
chromatin state
8
binding sites
8
eQTL
7
histone modifications
4
differential activity
4
variant allelic effects
1
caQTL
Date released
33
September, 2022
29
February, 2024
18
February, 2021
9
August, 2021
March, 2020
5
November, 2021
4
March, 2023
3
January, 2020
3
June, 2020
3
May, 2020
2
August, 2017
2
February, 2020
2
May, 2021
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
74
bed bed3+
25
tsv
22
bigWig
11
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
119
Homo sapiens
Biosample type
59
primary cell
53
tissue
cell line
7
in vitro differentiated cells
Organ
901
epithelium
611
kidney
418
connective tissue
351
brain
349
musculature of body
253
intestine
243
vasculature
235
pancreas
231
heart
228
limb
214
lung
186
blood vessel
143
extraembryonic component
139
large intestine
134
skin of body
119
liver
118
stomach
99
eye
87
embryo
83
small intestine
78
adipose tissue
72
adrenal gland
70
placenta
65
artery
64
ureter
51
mammary gland
49
penis
48
thymus
44
esophagus
42
gonad
37
spinal cord
36
bone element
33
spleen
25
prostate gland
23
thyroid gland
22
nerve
22
ovary
20
vein
19
lymphatic vessel
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
16
bronchus
15
mouth
13
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
114
AMP
5
ENCODE
Genome assembly (visualization)
92
hg19
49
GRCh38
1
hg18
biosample_type!
cell line
month_released!
March, 2020
BIOSAMPLE
TYPE
119 results
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Clear Filters
accessible chromatin
gene expression
candidate regulatory elements
target gene predictions
chromatin state
binding sites
eQTL
histone modifications
differential activity
variant allelic effects
caQTL
primary cell
hepatocyte
8
9
1
3
1
1
4
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
3
1
1
1
1
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
tissue
liver
4
1
13
8
9
1
7
2
1
1
right lobe of liver
1
2
1
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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