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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
24
accessible chromatin
24
gene expression
23
candidate regulatory elements
19
target gene predictions
15
chromatin state
10
binding sites
8
eQTL
8
histone modifications
5
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
39
September, 2022
30
February, 2024
23
February, 2021
9
August, 2021
9
March, 2020
7
November, 2021
4
June, 2020
4
March, 2023
3
January, 2020
3
May, 2020
2
August, 2017
2
February, 2020
2
May, 2021
2
May, 2022
1
April, 2020
1
January, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
90
bed bed3+
28
tsv
24
bigWig
13
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
144
Homo sapiens
Biosample type
79
primary cell
58
tissue
cell line
7
in vitro differentiated cells
Organ
906
epithelium
611
kidney
427
connective tissue
389
brain
358
musculature of body
255
intestine
255
vasculature
246
heart
243
pancreas
237
limb
215
lung
198
blood vessel
143
extraembryonic component
140
large intestine
134
skin of body
128
liver
119
stomach
99
eye
88
embryo
86
adipose tissue
84
small intestine
73
adrenal gland
71
artery
70
placenta
64
ureter
51
mammary gland
49
penis
49
thymus
45
esophagus
43
gonad
40
spinal cord
36
bone element
34
spleen
25
nerve
25
prostate gland
23
ovary
23
thyroid gland
21
vein
19
lymphatic vessel
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
16
bronchus
15
mouth
13
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
136
AMP
7
ENCODE
1
LungMap
Genome assembly (visualization)
113
hg19
56
GRCh38
1
hg18
biosample_type!
cell line
BIOSAMPLE
TYPE
144 results
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Clear Filters
accessible chromatin
gene expression
candidate regulatory elements
target gene predictions
chromatin state
binding sites
eQTL
histone modifications
variant allelic effects
differential activity
Fine-mapped variants
caQTL
primary cell
hepatocyte
8
13
1
3
1
1
4
2
endothelial cell of hepatic sinusoid
6
4
6
bronchial epithelial cell
1
4
2
2
2
1
hepatic stellate cell
3
1
1
1
1
1
1
pancreatic endothelial cell
1
3
+ See 3 more…
tissue
liver
4
1
13
10
9
1
7
2
1
1
right lobe of liver
1
2
1
1
1
3
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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